EMEP Master Diagram Index and Quality Gates

Master index of all 30+ mandatory diagram types across EMEP specifications, with type, location, phase, and quality gate checklist.

EMEP requires diagrams in every specification area. This index catalogs all mandated diagram types, their locations, and the phases in which they must be completed.

Diagram Index Table

Diagram	Type	Location	Spec	Phase	Tasks	Tests
Open-Weight Ecosystem Landscape	Flowchart	Context	Overview	Phase 0	Review	Visual inspection
Scope Mindmap	Mindmap	Vision and Scope	Overview	Phase 0	Review	Visual inspection
Primary Research Loop	Flowchart	Project Constitution	Overview	Phase 0	Review	Trace loop closure
Evidence Tree	Mindmap	Evidence Map	Research	Phase 0	Review	Tag coverage
Research-to-Component Graph	Graph	Component Mapping	Research	Phase 0	Review	Component coverage
Executive Dependency Chain	Flowchart	System Dependency Map	Maps	Phase 0	Review	Path coverage
Internal Component Dependency Graph	Graph	Component Dependency Graph	Maps	Phase 0	Review	Cycle detection
Data Flow with Split Boundaries	Flowchart	Data Flow Map	Maps	Phase 0	Review	Split isolation
Experiment State Machine	State diagram	Experiment Lifecycle	Maps	Phase 0	Review	Invalid transition detection
Level 1 Executive Architecture	Block diagram	Architecture Diagrams	Diagrams	Phase 0	Review	Component count
Level 2 Logical Architecture	Block diagram	Architecture Diagrams	Diagrams	Phase 0	Review	Grouping correctness
Level 3 Internal TensorEngine	Block diagram	Architecture Diagrams	Diagrams	Phase 1	Implementation	Unit test
Level 3 Internal EvolutionEngine	Block diagram	Architecture Diagrams	Diagrams	Phase 1	Implementation	Unit test
Runtime Topology	Deployment diagram	Architecture Diagrams	Diagrams	Phase 1	Implementation	Integration test
Storage Tiers	Block diagram	Architecture Diagrams	Diagrams	Phase 1	Implementation	Integration test
GPU Topology	Deployment diagram	Architecture Diagrams	Diagrams	Phase 1	Implementation	Integration test
Trust Boundary	Security diagram	Architecture Diagrams	Diagrams	Phase 1	Implementation	Security review
Model Supply Chain	Sequence diagram	Architecture Diagrams	Diagrams	Phase 1	Implementation	Security test
Deployment Topology	Deployment diagram	Architecture Diagrams	Diagrams	Phase 1	Implementation	Integration test
Compatibility Analysis Flowchart	Flowchart	Model Compatibility	Compatibility	Phase 2	Implementation	Unit test
Tokenizer Compatibility Flowchart	Flowchart	Tokenizer Compatibility	Compatibility	Phase 2	Implementation	Unit test
Architecture Compatibility Flowchart	Flowchart	Architecture Compatibility	Compatibility	Phase 2	Implementation	Unit test
Tensor Shape Validation Flowchart	Flowchart	Tensor Shape Validation	Compatibility	Phase 2	Implementation	Unit test
Merge Engine Algorithm	Flowchart	Merge Engine	Merge	Phase 3	Implementation	Unit test
Merge Strategy Decision Tree	Decision tree	Merge Strategies	Merge	Phase 3	Implementation	Unit test
Tensor Operations Flowchart	Flowchart	Tensor Operations	Merge	Phase 3	Implementation	Unit test
Merge Validation Flowchart	Flowchart	Merge Validation	Merge	Phase 3	Implementation	Unit test
SLERP Math Flowchart	Flowchart	SLERP Math	Math	Phase 3	Implementation	Numerical test
TIES Math Flowchart	Flowchart	TIES Math	Math	Phase 3	Implementation	Numerical test
DARE Math Flowchart	Flowchart	DARE Math	Math	Phase 3	Implementation	Numerical test
Task Arithmetic Flowchart	Flowchart	Task Arithmetic	Math	Phase 3	Implementation	Numerical test
Tensor Math Flowchart	Flowchart	Tensor Math	Math	Phase 3	Implementation	Numerical test
Evolution Engine Flowchart	Flowchart	Evolution Engine	Evolution	Phase 4	Implementation	Unit test
Genome Encoding Diagram	Block diagram	Genome	Evolution	Phase 4	Implementation	Unit test
Population Management Flowchart	Flowchart	Population	Evolution	Phase 4	Implementation	Unit test
Mutation Operator Flowchart	Flowchart	Mutation	Evolution	Phase 4	Implementation	Unit test
Crossover Operator Flowchart	Flowchart	Crossover	Evolution	Phase 4	Implementation	Unit test
Selection Mechanism Flowchart	Flowchart	Selection	Evolution	Phase 4	Implementation	Unit test
Fitness Computation Flowchart	Flowchart	Fitness	Evolution	Phase 4	Implementation	Unit test
Multi-Objective Optimization Flowchart	Flowchart	Multi-Objective Optimization	Evolution	Phase 4	Implementation	Unit test
Evaluation Framework Flowchart	Flowchart	Framework	Evaluation	Phase 5	Implementation	Integration test
Benchmark Specification Flowchart	Flowchart	Benchmark Specification	Evaluation	Phase 5	Implementation	Unit test
Benchmark Catalog Index	Table / Index	Benchmark Catalog	Evaluation	Phase 5	Implementation	Data validation
Persian Evaluation Flowchart	Flowchart	Persian Evaluation	Evaluation	Phase 5	Implementation	Integration test
Safety Evaluation Flowchart	Flowchart	Safety Evaluation	Evaluation	Phase 5	Implementation	Integration test
Regression Evaluation Flowchart	Flowchart	Regression Evaluation	Evaluation	Phase 5	Implementation	Integration test
Benchmark Integrity Flowchart	Flowchart	Benchmark Integrity	Evaluation	Phase 5	Implementation	Security test
Experiment Tracking Flowchart	Flowchart	Experiment Tracking	Tracking	Phase 6	Implementation	Integration test
Experiment Schema Diagram	ER diagram	Experiment Schema	Tracking	Phase 6	Implementation	Schema validation
Model Registry ER Diagram	ER diagram	Model Registry	Tracking	Phase 6	Implementation	Schema validation
Dataset Registry ER Diagram	ER diagram	Dataset Registry	Tracking	Phase 6	Implementation	Schema validation
Artifact Registry Flowchart	Flowchart	Artifact Registry	Tracking	Phase 6	Implementation	Integration test
Model Lineage Graph	Graph	Model Lineage	Tracking	Phase 6	Implementation	Trace test
Reproducibility Protocol Flowchart	Flowchart	Reproducibility Protocol	Tracking	Phase 6	Implementation	Integration test
Model Provenance Sequence	Sequence diagram	Model Provenance	Tracking	Phase 6	Implementation	Security test
Quantization Flowchart	Flowchart	Quantization	Deployment	Phase 8	Implementation	Unit test
Inference Flowchart	Flowchart	Inference	Deployment	Phase 8	Implementation	Integration test
Deployment Specification Flowchart	Flowchart	Deployment Specification	Deployment	Phase 8	Implementation	Integration test
Offline Deployment Flowchart	Flowchart	Offline Deployment	Deployment	Phase 8	Implementation	Integration test
Performance Validation Flowchart	Flowchart	Performance Validation	Deployment	Phase 8	Implementation	Performance test
API Specification Sequence	Sequence diagram	API Specification	Interfaces	Phase 1	Implementation	Integration test
CLI Specification Flowchart	Flowchart	CLI Specification	Interfaces	Phase 1	Implementation	Unit test
Configuration Specification Diagram	Block diagram	Configuration Specification	Interfaces	Phase 1	Implementation	Schema validation
Testing Strategy Overview	Block diagram	Testing Strategy	Testing	Phase 0	Review	Review checklist
Unit Test Plan Flowchart	Flowchart	Unit Test Plan	Testing	Phase 1	Implementation	Review checklist
Integration Test Plan Flowchart	Flowchart	Integration Test Plan	Testing	Phase 2	Implementation	Review checklist
Model Merge Test Flowchart	Flowchart	Model Merge Tests	Testing	Phase 3	Implementation	Unit test
Numerical Testing Flowchart	Flowchart	Numerical Testing	Testing	Phase 3	Implementation	Unit test
Evaluation Testing Flowchart	Flowchart	Evaluation Testing	Testing	Phase 5	Implementation	Integration test
Performance Testing Flowchart	Flowchart	Performance Testing	Testing	Phase 8	Implementation	Performance test
Security Testing Flowchart	Flowchart	Security Testing	Testing	Phase 7	Implementation	Security test
Failure Injection Flowchart	Flowchart	Failure Injection	Testing	Phase 9	Implementation	Integration test
Failure Modes Diagram	Fault tree	Failure Modes	Risk	Phase 0	Review	Risk review
Risk Management Flowchart	Flowchart	Risk Management	Risk	Phase 0	Review	Risk review
Risk Register Table	Table	Risk Register	Risk	Phase 0	Review	Risk review
Roadmap Timeline	Gantt / Timeline	Roadmap	Project	Phase 0	Review	Milestone review
Project Management Flowchart	Flowchart	Project Management	Project	Phase 0	Review	Review checklist
Task Dependency Graph	Graph	Tasks	Project	Phase 0	Review	Review checklist
KPI Specification Table	Table	KPI Specification	Project	Phase 0	Review	Review checklist
Phase 0-9 Flowcharts	Flowchart	Phases through Phase 9	Project	Phase 0	Review	Review checklist
Consistency Report Flowchart	Flowchart	Consistency Report	Audit	Phase 9	Implementation	Audit test
Traceability Matrix Table	Table	Traceability Matrix	Audit	Phase 9	Implementation	Audit test
Open Questions List	List	Open Questions	Audit	Phase 0	Review	Review checklist

Quality Gate Checklist

Use this checklist before marking any phase complete:

• Every specification page contains at least one Mermaid diagram
• Every flowchart uses START/INPUT/VALIDATION/PROCESSING/DECISION/BRANCHES/OUTPUT/END nodes where applicable
• Every decision tree covers all branches (no implicit else)
• Every sequence diagram numbers messages chronologically
• Every state diagram lists all invalid transitions explicitly
• Every diagram is referenced by name in the surrounding prose
• Diagram source renders without Mermaid syntax errors
• Diagram captions explain what the reader should conclude
• Cross-links connect diagrams to related specification pages
• Diagrams use consistent color coding (blue: input, green: output, red: failure, orange: optional)
• No diagram exceeds 20 nodes without decomposition into sub-diagrams
• All algorithm flowcharts match the template in Algorithm Flowchart Index

Next Steps

See Architecture Diagrams for the actual Mermaid source of all architectural views, or Algorithm Flowchart Index for the standardized algorithm template.